|
Composition of Crested Duck bone marrow cDNAs |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Total sequenced cDNAs |
2128 |
% |
|
|
No insert, poor sequence read, insufficient BLASTn
alignment |
234 |
|
|
No match in Genbank |
202 |
|
|
Mitochondrial DNA, rRNA |
165 |
9.8 |
|
ESTs representing Hemoglobins (total) |
611 |
36.1 |
|
ESTs representing other proteins |
916 |
54.1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
The twenty most frequent transcripts in Crested Duck bone
marrow |
|
|
|
|
|
|
|
Gene |
Counts |
% |
|
Alpha A hemoglobin subunit (HBA2) |
385 |
22.75 |
|
Leukocyte cell-derived chemotaxin 2 (LECT2) |
171 |
10.11 |
|
Alpha D hemoglobin subunit (HBA1) |
163 |
9.63 |
|
Beta defensin (DEFB) |
76 |
4.49 |
|
Beta A hemoglobin subunit (HBB) |
63 |
3.72 |
|
Cytochrome oxidase subunit I (MT-CO1) |
41 |
2.42 |
|
Immunoglobulin J chain (IGJ) |
39 |
2.30 |
|
Ubiquitin C (UBC) |
22 |
1.30 |
|
Beta-defensin 3 (DEFB3) |
20 |
1.18 |
|
ATPase subunit 6, and cytochrome c oxidase subunit
III (MT-CO3) |
18 |
1.06 |
|
mRNA for hypothetical proteins |
18 |
1.06 |
|
Cytochrome C oxidase subunit II (MT-CO2) |
17 |
1.00 |
|
Predicted: hypothetical loci mRNA |
13 |
0.77 |
|
Beta-defensin 1 (DEFB1) |
12 |
0.71 |
|
Heat shock protein 90 alpha (HSP90A) |
9 |
0.53 |
|
Predicted: similar to cysteine proteinase inhibitor |
8 |
0.47 |
|
Predicted: similar to transglutaminase 3 (TGM3) |
8 |
0.47 |
|
Lymphocyte antigen 86 (LY86) |
7 |
0.41 |
|
H5 histone gene |
7 |
0.41 |
|
|
|
|
|
|
|
|
|
|
BAC clone from chromosome z |
7 |
0.41 |
|
|
|
|
|
|
|
|
|
|
Percentage of the total |
|
65.2 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
