Kevin G. McCracken Institute of Arctic Biology, Department of Biology and Wildlife, and University of Alaska Museum of the North |
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| Research Interests: |
My research interests are in evolutionary biology and the genetics of adaptation. Field studies and analytical methods from a variety of different disciplines including genetics, physiology, protein chemistry, and wildlife population biology are being used to address questions about the process of adaptation and natural selection, at both the molecular level and in whole organisms. Waterfowl and other species inhabiting high-altitude regions such as the Andes are of particular interest. High-altitude regions are characterized by simple physiographic differences in environmental variables such as ambient pressure and temperature that vary across elevational gradients in well-defined ways. This makes the study of natural selection and its effects on genetic polymorphism simpler and less complicated than it might be for complex traits that have many environmental correlates. Hypoxia in particular is one of the most important factors influencing survival at high elevations, and biochemical changes in the blood protein hemoglobin (Hb) have been shown to mitigate the effects of chronic hypoxia in high-altitude adapted populations. Surveys of hemoglobin amino acid polymorphism in Andean waterfowl suggest that genotypic variants that are over-represented in high-altitude populations have different fitness rankings in different elevational zones and influence Hb-O2 affinity. Our studies have further revealed that parallel substitutions evolved in distantly related lineages and are concentrated in the same few regions of the protein. Experimental studies of Hb function and blood properties are being combined with mutli-locus population genetic analyses to study the mechanistic basis of these apparent adaptations. One question we aim to answer is whether the same or different mechanisms underlie parallel changes in replicate lineages that independently colonized the Andes and other high-altitude regions. Other questions focus on the role of phenotypic plasticity, and specifically how individuals modulate their Hb-O2 carrying capacity when they disperse across elevational gradients. Additional projects in our lab are examining the influence of selection on non-coding DNA sequences, as well as a variety of population-level studies of waterfowl species, including their role as intercontinental vectors of avian influenza and paramyxoviruses. Collaborators include Jay Storz at the University of Nebraska, Roy Weber at the University of Aarhus, Jeff Peters at Wright State University, Mary Kuhner at the University of Washington, and Daniel Cadena and his students at Universidad de los Andes in Colombia. We also maintain close working ties with investigators at the Alaska Science Center and several South American museums including the Centro de Ornitologia y Biodiversidad (CORBIDI) and the Museo Argentino de Ciencias Naturales (MACN). Students with strong interests in population genetics, high-altitude physiology, Andean biogeography, or any aspect of waterfowl ecology and management are encouraged to contact us. If you are interested in conducting research in my lab, click here for my suggestions for prospective graduate students. The Department of Biology and Wildlife at the University of Alaska Fairbanks offers competitive teaching and research assistantships. Applications are reviewed twice annually with deadlines on 15 September and 15 January. You can follow recent activitites in my lab on our Google+ website. Grant support: NSF 0444748, 0746365, 0814322, 0949439/0949931 |
| People in the Lab: | |||
| Andrea Price | M.S. Student | ||
| Natalia Gutiérrez | M.S. Student Universidad de los Andes, Bogota, Colombia -coadvised with Daniel Cadena | ||
| María Lozano | M.S. Student Universidad de los Andes, Bogota, Colombia - coadvised with Daniel Cadena | ||
| Luis Alza | Centro de Ornitología y Biodiversidad, Lima, Peru | ||
| Daniela Wilner | REU student | ||
| Matthew Smith | REU student | ||
| Former Ph.D. Students: | When they graduated and where they are now: | ||
| Robert Wilson | 2011 - USGS, Alaska Science Center | Principles of Genetics | |
| Mariana Bulgarella | 2010 - Massey University, New Zealand | Systematic & Comparative Biology | |
| Travis Booms | 2010 - Alaska Department of Fish and Game | Modern Synthesis of Evolution | |
| John Pearce | 2008 - USGS, Alaska Science Center | High-altitude Adaptation | |
| Jen Schmidt | 2007 - UAF | ||
| Sarah Sonsthagen | 2006 - USGS, Alaska Science Center | ||
| Coadvised Ph.D. Students: | |||
| Patrick-Jean Guay | 2008 - Victoria University, Melbourne, Australia | ||
| Irina Kulikova | 2005 - Institute of Biology & Soil Science, Vladivostok, Russia | ||
| Former Postdocs: | |||
| Jeff Peters | Wright State University | ||
| Highlighted Research Articles: | ||||
| Publications: (bold text indicates lab member) | ||
| 2012 | Wilson, R. E., M. D. Eaton, and K. G. McCracken. Plumage and body size differences in Blue-winged Teal and Cinnamon Teal. Avian Biology Research (in press). | |
| 2012 | Peters, J. L., T. E. Roberts, K. Winker, and K. G. McCracken. Heterogeneity in genetic diversity among non-coding loci fails to fit neutral coalescent models of population history. PLoS ONE (in press). | |
| 2012 | Bulgarella, M., J. L. Peters, C. Kopuchian, T. Valqui, R. E. Wilson, and K. G. McCracken. Multilocus coalescent analysis of haemoglobin differentiation between low- and high-altitude populations of crested ducks (Lophonetta specularioides). Molecular Ecology 21:350-368. | |
| 2011 | Booms, T. L., S. L. Talbot, G. K. Sage, B. J. McCaffery, K. G. McCracken, and P. F. Schempf. Nest-site fidelity and dispersal of Gyrfalcons estimated by noninvasive genetic sampling. Condor 113:768-778. | |
| 2011 | Wilson, R. E., M. D. Eaton, S. A. Sonsthagen, J. L. Peters, K. P. Johnson, B. Simarra, and K. G. McCracken. Speciation, subspecies divergence, and paraphyly in Cinnamon Teal and Blue-winged Teal. Condor 113:747-761. | |
| 2011 | McCracken, K. G., and R. E. Wilson. Gene flow and hybridization between numerically imbalanced populations of two duck species in the Falkland Islands. PLoS ONE 6:e23173 | |
| 2011 | Sonsthagen, S. A., S. L. Talbot, K. T. Scribner, and K. G. McCracken. Multilocus phylogeography and population structure of common eiders breeding in North America and Scandinavia. Journal of Biogeography 38:1368-1380 | |
| 2010 | Guay, P.-J., R. T. Chesser, R. A. Mulder, A. D. Afton, D. C. Paton, and K. G. McCracken. East-west genetic differentiation in Musk Ducks (Biziura lobata) of Australia suggests late Pleistocene divergence at the Nullarbor Plain. Conservation Genetics 11:2105-2120 | |
| 2010 | McCracken, K. G., C. P. Barger, and M. D. Sorenson. Phylogenetic and structural analysis of the HbA (alpha-A/beta-A) and HbD (alpha-D/beta-A) hemoglobin genes in two high-altitude waterfowl from the Himalayas and the Andes: Bar-headed Goose (Anser indicus) and Andean Goose (Chloephaga melanoptera). Molecular Phylogenetics and Evolution 56:649-658 | |
| 2010 | Bulgarella, M., M. D. Sorenson, J. L. Peters, R. E. Wilson, and K. G. McCracken. Phylogenetic relationships of Amazonetta, Speculanas, Lophonetta, and Tachyeres: Four morphologicall divergent duck genera endemic to South America. Journal of Avian Biology 41:186-199 | |
| 2010 | Wilson, R. E., M. Eaton, T. H. Valqui, and K. G. McCracken. Ecogeographic variation in Cinnamon Teal (Anas cyanoptera) along elevational and latitudinal gradients. Ornithological Monographs 67:141-161 | |
| 2010 | Sonsthagen, S. A., S. L. Talbot, R. B. Lanctot, and K. G. McCracken. Do waterfowl nest in kin groups? Microgeographic genetic structure in a philopatric sea duck. Molecular Ecology 19:647-657 | |
| 2009 | McCracken, K. G., C. P. Barger, M. Bulgarella, K. P. Johnson, M. K. Kuhner, A. V. Moore, J. L. Peters., J. Trucco, T. H. Valqui, K. Winker, and R. E. Wilson. Signatures of high-altitude adaptation in the major hemoglobin of five species of Andean dabbling ducks. American Naturalist 174:631-650 | |
| 2009 | Pearce, J. M., K. G. McCracken, T. K. Christensen, and Y. N. Zhuravlev. Migratory patterns and population structure among breeding and wintering Red-breated (Mergus serrator) and Common Mergansers (M. merganser). The Auk 126:784-798 | |
| 2009 | Sonsthagen, S. A., S. L. Talbot, R. B. Lanctot, K. Scribner, and K. G. McCracken. Hierarchical spatial genetic structure of Common Eiders (Somateria mollissima) breeding along a migratory corridor. The Auk 126:744-754 | |
| 2009 | McCracken, K. G., C. P. Barger, M. Bulgarella, K. P. Johnson, S. A. Sonsthagen, J. Trucco, T. H. Valqui, R. E. Wilson, K. Winker, and M. D. Sorenson. Parellel evolution in the major hemoglobin genes of eight species of Andean waterfowl. Molecular Ecology 18:3992-4005 | |
| 2009 | Bulgarella, M., N. C. Stewart, V. B. Fedorov, A. V. Moore, and K. G. McCracken. Hemoglobin transcript abundance in a bone marrow cDNA library of Crested Ducks (Lophonetta specularioides) in the Peruvian high Andes. The Auk 126:666-672 [Summary of dbEST accessions] | |
| 2009 | McCracken, K. G., M. Bulgarella, K. P. Johnson, M. K. Kuhner, J. Trucco, T. H. Valqui, R. E. Wilson, and J. L. Peters. Gene flow in the face of countervailing selection: Adaptation to high-altitude hypoxia in the beta A hemoglobin subunit of Yellow-billed Pintails. Molecular Biology and Evolution 26:815-827 [Cited by Faculty of 1000] | |
| 2009 | Schmidt, J. I., K. J. Hundertmark, R. T. Bowyer, and K. G. McCracken. Population structure and genetic diversity of moose in Alaska. Journal of Heredity 100:170-180 | |
| 2008 | Wilson, R. E., and K. G. McCracken. Specimen shrinkage in Cinnamon Teal. Wilson Journal of Ornithology 120:390-392 | |
| 2008 | Wilson, R. E., M. Eaton, and K. G. McCracken. Color divergence among Cinnamon Teal (Anas cyanoptera) subspecies from North America and South America. Ornitologia Neotropical 19:307-314 | |
| 2007 | Bulgarella, M., R. E. Wilson, C. Kopuchian, T. H. Valqui, and K. G. McCracken. Elevational variation in body size of Crested Ducks (Lophonetta specularioides) from the Central High Andes, Mendoza, and Patagonia. Ornitologia Neotropical 18:587-602 | |
| 2007 | Sonsthagen, S. A., S. L. Talbot, and K. G. McCracken. Genetic characterization of Common Eiders breeding in the Yukon-Kuskokwin Delta, Alaska. Condor 109:878-893 | |
| 2007 | Wilson, R. E., S. A. Sonsthagen, C. P. Barger, and K. G. McCracken. Asymmetric molt or feather wear in Flying Steamer Ducks (Tachyeres patachonicus) from coastal habitats in Argentina. Ornitologia Neotropical 18:293-300 | |
| 2007 | McCracken, K. G. [Review of] Ducks, Geese, and Swans, Vol. 1 & 2. Quarterly Review of Biology 82:157 | |
| 2007 | Brennan, P. L. R., R. O. Prum, K. G. McCracken, M. D. Sorenson, R. E. Wilson, and T. R. Birkhead. Coevolution of male and female genital morphology in waterfowl. PLoS ONE 2:e419 | |
| 2007 | Winker, K. , K. G. McCracken, D. D. Gibson, C. L. Pruett, R. Meier, F. Huettmann, M. Wege, I. V. Kulikova, Y. N. Zhuravlev, M. L. Perdue, E. Spackman, D. L. Suarez , and D. E. Swayne. Movement of birds and avian influenza from Asia to Alaska. Emerging Infectious Diseseases 13:547-552 | |
| 2007 | Spackman, E., K. G. McCracken, K. Winker, and D. E. Swayne. An avian influenza virus from waterfowl in South America contains genes from North American avian and equine lineages. Avian Diseases 51:273-274 | |
| 2006 | Wilson, R. E., T. H. Valqui, and K. G. McCracken. Aberrant plumage in the Yellow-billed Pintail Anas georgica. Wildfowl 56:192-196 | |
| 2006 | Sonsthagen, S. A., S. L. Talbot, R. B. Lanctot, K. T. Scribner, and K. G. McCracken. Population genetic structure of Common Eiders (Somateria mollissima) nesting on coastal barrier islands adjacent to oil facilities in the Beaufort Sea, Alaska. U.S. Department of Interior, Minerals Management Service, Final Report OCS Study MMS 2006-40:1-94. | |
| 2006 | Spackman, E., K. G. McCracken, K. Winker, and D. E Swayne. H7N3 avian influenza virus found in a South American wild duck is related to the Chilean 2002 poultry outbreak, contains genes from equine and North American wild bird lineages, and is adapted to domestic turkeys. Journal of Virology 80:7760–7764 | |
| 2006 | Johnson, K. P., M. Kennedy, and K. G. McCracken. Reinterpreting the origins of flamingo lice: Cospeciation or host-switching. Biology Letters 2:275-278 | |
| 2005 | Kulikova, I. V., S. V. Drovetski, D. D. Gibson, R. J. Harrigan, S. Rohwer, M. D. Sorenson, K. Winker, Y. N. Zhuravlev, and K. G. McCracken. Phylogeography of the Mallard (Anas platyrhynchos): Hybridization, dispersal, and lineage sorting contribute to complex geographic structure. The Auk 122:949-965 | |
| 2005 | Peters, J. L., K. G. McCracken, R. E. Wilson, Y. N. Zhuravlev, Y. Lu, K. P. Johnson, and K. E. Omland. Phylogenetics of wigeons and allies (Anatidae: Anas spp.): The importance of sampling multiple loci and multiple individuals. Molecular Phylogenetics and Evolution 35:209-224 | |
| 2005 | McCracken, K. G., and M. D. Sorenson. Is homoplasy or lineage sorting the source of incongruent mtDNA and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)? Systematic Biology 54:35-55 | |
| 2005 | Callaghan, D., and K. G. McCracken. Musk Duck: Taxonomy pp. 213 in J. Kear (ed.) Bird Families of the World: Ducks, Geese, and Swans. Oxford University Press, Oxford. | |
| 2005 | McCracken, K. G. Musk Duck Biziura lobata pp. 213-217 in J. Kear (ed.) Bird Families of the World: Ducks, Geese, and Swans. Oxford University Press, Oxford. | |
| 2005 | Callaghan, D., and K. G. McCracken. The stiff-tailed ducks and their allies: Taxonomy in J. Kear (ed.) pp. 343-346 in Bird Families of the World: Ducks, Geese, and Swans. Oxford University Press, Oxford. | |
| 2004 | Wilson, R. E., S. D. Goldfeder, and K. G. McCracken. Bill sexual dichromatism of Yellow-billed Pintail (Anas georgica) and Speckled Teal (A. flavirostris). Ornitologia Neotropical 15:543-545 | |
| 2004 | Kulikova, I. V., Y. N. Zhuravlev, and K. G. McCracken. Asymmetric hybridization and sex-biased gene flow between Eastern Spot-billed Ducks and Mallards in the Russian Far East. The Auk 121:930-949 | |
| 2003 | McCracken, K. G., J. Hemmings, D. C. Paton, and A. D. Afton. Capture methods for Musk Ducks. Wildfowl 54:211-214 | |
| 2002 | McCracken, K. G., P. J. Fullagar, E. C. Slater, D. C. Paton, and A. D. Afton. Advertising displays of male Musk Ducks indicate population subdivision across the Nullarbor Plain of Australia. Wildfowl 53:137-154 | |
| 2001 | McCracken, K. G., R. E. Wilson, P. J. McCracken, and K. P. Johnson. Are ducks impressed by drakes' display. Nature 413:128 | |
| 2001 | McCracken, K. G., W. P. Johnson, and F. H. Sheldon. Molecular population genetics, phylogeography, and conservation biology of the Mottled Duck (Anas fulvigula ). Conservation Genetics 2:87-102 | |
| 2001 | McClellan, D. A., and K. G. McCracken. Estimating the influence of selection on the variable amino acid sites of the cytochrome b protein functional domains. Molecular Biology and Evolution 18:917-925 | |
| 2000 | McCracken, K. G., D. C. Paton, and A. D. Afton. Sexual size dimorphism of the Musk Duck. Wilson Bulletin 112:457-466 | |
| 2000 | McCracken, K. G., J. Harshman, M. D. Sorenson, and K. P. Johnson. Are Ruddy Ducks and White-headed Ducks the same species? British Birds 93:396-398 | |
| 2000 | McCracken, K. G., A. D. Afton, and D. C. Paton. Nest and eggs of Musk Ducks (Biziura lobata) at Murray Lagoon, Cape Gantheaume Conservation Park, Kangaroo Island, South Australia. South Australian Ornithologist 33:65-70 | |
| 2000 | McCracken, K. G. The 20-cm spiny penis of the Argentine Lake Duck (Oxyura vittata). The Auk 117:820-825 | |
| 2000 | McCracken, K. G., A. D. Afton, and M. S. Peters. Condition bias of hunter-shot Ring-necked Ducks exposed to lead. Journal of Wildlife Management 64:584-590 | |
| 2000 | Sheldon, F. H., C. E. Jones, and K. G. McCracken. Relative patterns and rates of evolution in heron nuclear and mitochondrial DNA. Molecular Biology and Evolution 17:437-450 | |
| 1999 | McCracken, K. G., J. Harshman, D. A. McClellan, and A. D. Afton. Data set incongruence and correlated character evolution: An example of functional convergence in the hind-limbs of stifftail diving ducks. Systematic Biology 48:683-714 | |
| 1999 | McCracken, K. G. Systematics, ecology, and social biology of the Musk Duck (Biziura lobata) of Australia. Ph.D. Dissertation, Louisiana State University, Baton Rouge, Louisiana. | |
| 1998 | McCracken, K. G. [Review of] Ruddy ducks and other stifftails: Their behavior and biology. Quarterly Review of Biology 73:362-363 | |
| 1998 | McCracken, K. G., and F. H. Sheldon. Molecular and osteological heron phylogenies: Sources of incongruence. The Auk 115:127-141 | |
| 1997 | McCracken, K. G., A. D. Afton, and R. T. Alisauskas. Nest morphology and body size of Ross's Geese and Lesser Snow Geese. The Auk 114:610-618 | |
| 1997 | McCracken, K. G., and F. H. Sheldon. Avian vocalizations and phylogenetic signal. Proceedings of the National Academy of Science USA. 94:3833-3836 | |
| 1995 | Sheldon, F. H., K. G. McCracken, and K. D. Stuebing. Phylogenetic relationships of the Zigzag Heron (Zebrilus undulatus) and White-crested Bittern (Tigriornis leucolophus) estimated by DNA-DNA hybridization. The Auk 112: 672-679 | |
| 1995 | McCracken, K. G., D. Amrol, N. Walker, and G. B. Craig, Jr. Ectoparasites from mammals of Michigan's Upper Peninsula. Vector Control Bulletin of the North Central States 4:42-53. |
If you would like to find out more information about the McCracken Lab you can write to: Institute of Arctic Biology, 902 N. Koyukuk Dr., University of Alaska Fairbanks, Fairbanks, Alaska 99775; call 1 (907) 474-7640; or e-mail kmccrack at iab.alaska.edu |
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Last Updated: 14 January 2012
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